Genetics · MU Sofia

1. General aspects of genetics and medicine: personalised medicine, rare diseases, the Human Genome Project and genomics in healthcare.

Inside: 22 sections · 17 labelled pictures · 3 tables · 26 flashcards · 8 min

Topic 1 of 79 in the MU Sofia syllabus for Genetics (Medicine, Year 3). The free AceMed note covers it in 22 sections, about 1,005 words (8 min of reading), with 26 flashcards.

In this note

  1. Pharmacogenetics and pharmacogenomics. Polymorphic monogenic pharmacogenetic defects. CYP450 superfamily variants: CYP2D6, CYP2C9, CYP2C19, CYP3A4. FGD in individuals with genetic diseases.
  2. I. GENERAL OVERVIEW
  3. II. CYP450 SUPERFAMILY – GENERAL CHARACTERISTICS
  4. III. CYP2D6
  5. IV. CYP2C9
  6. V. CYP2C19
  7. VI. CYP3A4
  8. VII. COMPARISON OF MAJOR CYP VARIANTS
  9. VIII. FGD – PHARMACOGENETICS IN INDIVIDUALS WITH GENETIC DISEASES
  10. Conventional therapy of genetic diseases. Orphan drugs.
  11. I. GENERAL CONCEPT OF THERAPY IN GENETIC DISEASES
  12. II. PRINCIPLES OF CONVENTIONAL THERAPY OF GENETIC DISEASES
  13. III. DIETARY AND METABOLIC THERAPY
  14. IV. ENZYME AND PROTEIN REPLACEMENT THERAPY
  15. V. HORMONE AND FACTOR REPLACEMENT
  16. VI. PHARMACOLOGICAL MODULATION OF PATHWAYS
  17. VII. SYMPTOMATIC AND SUPPORTIVE THERAPY
  18. VIII. PREVENTIVE THERAPY AND EARLY INTERVENTION
  19. IX. ORPHAN DRUGS
  20. X. TYPES OF ORPHAN DRUGS USED IN GENETIC DISEASES
  21. XI. CHALLENGES OF ORPHAN DRUG THERAPY
  22. XII. ROLE OF GENETIC COUNSELING IN THERAPY

I. GENERAL OVERVIEW

Many clinically important differences in drug response are caused by polymorphisms in genes encoding cytochrome P450 (CYP450) enzymes. These enzymes are responsible for the phase I metabolism of most commonly used drugs.

Because these polymorphisms are common in the population, they represent polymorphic monogenic pharmacogenetic defects.

II. CYP450 SUPERFAMILY – GENERAL CHARACTERISTICS

What is the CYP450 system?

The cytochrome P450 (CYP450) enzymes are a superfamily of heme-containing monooxygenases, primarily located in the liver, that catalyze:

  • oxidation,
  • reduction,
  • hydroxylation of drugs and xenobiotics.

Why CYP polymorphisms matter

Genetic variation in CYP genes leads to different metabolic phenotypes, which directly affect:

  • plasma drug levels,
  • efficacy,
  • toxicity,
  • risk of adverse drug reactions.

Metabolizer Phenotypes

III. CYP2D6

CYP2D6 metabolizes ~25% of commonly prescribed drugs, despite representing a small proportion of hepatic CYP enzymes.

Drugs Metabolized by CYP2D6

  • Antidepressants (TCAs, SSRIs)
  • Antipsychotics
  • Beta-blockers
  • Opioids (codeine, tramadol)
  • Antiarrhythmics

Genetic Variability

  • Gene deletions → poor metabolizers
  • Gene duplications → ultrarapid metabolizers

Pathophysiology

  1. CYP2D6 activity determines drug activation or inactivation.
  2. Poor metabolizers accumulate parent drug → toxicity.
  1. Ultrarapid metabolizers clear drug rapidly or overproduce active metabolites.

Clinical Examples

  • Codeine:
  • PM → inadequate analgesia
  • UM → excessive morphine production → toxicity
  • Antidepressants → increased side effects in PMs

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