Chemistry · MU Plovdiv

23. Five-membered heterocyclic compounds with two hetero atoms - pyrazole, imidazole and thiazole -structures. Biologically active derivatives of the above mentioned compounds.

Inside: 8 sections · 14 labelled pictures · 23 flashcards · 5 min

Topic 23 of 26 in the MU Plovdiv syllabus for Chemistry (Medicine, Year 1). The free AceMed note covers it in 8 sections, about 759 words (5 min of reading), with 23 flashcards.

In this note

  1. Heterocyclic compounds with two nitrogen atoms. (1,3-diazole). Structure.
  2. acid-base properties
  3. Tautomerism in imidazole derivatives. Histidine and histamine.
  4. Antihistamines.
  5. Pyrimidine (1,3-diazine).
  6. N-Alkylation (reaction with iodomethane).
  7. Pyrimidine bases: cytosine, uracil and thymine.
  8. Caffeine.

Heterocyclic compounds with two nitrogen atoms. (1,3-diazole). Structure.

  • Structure:
  • Imidazole is a five-membered heterocyclic compound, also known as 1,3-diazole.
  • It contains two nitrogen atoms and three carbon atoms in a ring structure.
  • Properties:
  • Aromatic: Imidazole exhibits aromatic character due to its cyclic structure and electron delocalization.
  • Amphoteric: Imidazole can act as both an acid (H+ donor) and a base (H+ acceptor) due to the presence of two nitrogens with different properties.
  • One nitrogen atom (N1) can donate a proton (acidic).
  • The other nitrogen atom (N2) lacks a lone pair and cannot accept a proton (not basic).
  • Reactions:
  • Imidazole can undergo substitution reactions (SN2 mechanism) at positions 4 and 5 of the ring.

Tautomerism in imidazole derivatives. Histidine and histamine.

  • Tautomerism: Imagine a molecule that can exist in two very similar forms, like a shape-shifter. These forms, called tautomers, share the same atoms but have a flipped proton and its electron pair within the molecule.
  • Imidazole: This five-membered ring with two nitrogens is particularly good at this shape-shifting due to the presence of a lone pair on one nitrogen.
  • The Flip: The lone pair can attract a proton from the other nitrogen, creating two possible forms:
  • N-H Tautomer: Proton sits on a specific nitrogen (N).
  • N+ Tautomer: Proton is on the other nitrogen, with a positive charge (N+).
  • Fast Change: These forms are constantly switching back and forth, making it difficult to isolate one form.
  • Why It Matters: Tautomerism affects the reactivity of imidazole derivatives and plays a role in the function of biomolecules like histidine.
  • Histidine:
  • Amino Acid: Histidine is an essential amino acid, meaning your body can't produce it and needs to obtain it from food.
  • Structure: It has a unique structure with an imidazole ring (a five-membered ring containing two nitrogens) attached to its central carbon backbone.
  • Histamine:
  • Biogenic Amine: Histamine is a signaling molecule with various functions in the body.
  • Neurotransmitter: It acts as a neurotransmitter in the brain, involved in sleep-wake regulation, learning, and memory.
  • Immune Response: Histamine also plays a crucial role in the immune response, especially allergic reactions. It triggers inflammation, itching, and mucus production when released by immune cells.
  • Symptoms: When released excessively during allergic reactions, histamine can cause:
  • Diarrhea
  • Headache
  • Asthma
  • Hypotension (low blood pressure)
  • Treatment: These symptoms can be alleviated by antihistamines, medications that block histamine receptors.
  • Synthesis: Histamine is formed by a simple process called decarboxylation, where a carboxyl group (COOH) is removed from histidine by an enzyme.
  • The Connection:

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