Biology · MU Sofia

14. Structure of metaphase chromosomes. Human karyotype. Methods of karyotyping.

Explains the structure of metaphase chromosomes and the human karyotype, including sets, karyograms and idiograms, and chromosome classes by centromere position. It then covers aberrations, polytene and lampbrush chromosomes, and the Barr body. The second half surveys karyotyping methods: cell preparation, G-, R-, C-, T-, Q- and NOR-banding, FISH and comparative genomic hybridisation, with several diagrams throughout.

Inside: 3 sections · 7 labelled pictures · 6 min

Topic 14 of 64 in the MU Sofia syllabus for Biology (Dental Medicine, Year 1). The free AceMed note covers it in 3 sections, about 886 words (6 min of reading).

In this note

  1. Introduction
  2. Methods of Karyotyping & Chromosomal Analysis
  3. Post-Banding Analysis and Advanced Chromosomal Techniques

Introduction

Karyotype

  • Definition: The number and visual appearance of chromosomes in an organism's cell nuclei.
  • Sets:
  • Haploid: One copy of each chromosome.
  • Diploid: Two copies of each chromosome (one paternal, one maternal).
  • Origins: Maternal chromosomes from oocytes, paternal from spermatozoa.
  • Types: Gonosomes (sex chromosomes), Autosomes (non-sex chromosomes).
  • Karyogram: Chromosomes arranged in homologous pairs, numbered by length and centromere position.
  • Idiogram: Diagrammatic representation of a karyotype.

Classification of chromosomes based on centromere position

  • telocentric chromosomes are not normal - they can be result of chromosomal aberration

Metaphase Chromosomal set

Idiogram

Karyogram

Chromosome Classification & Evolution

  • Centromere Position: Telocentric chromosomes, often abnormal.
  • Evolution: Due to chromosomal aberrations like deletions, duplications, inversions, affecting fertility and potentially leading to new species.
  • Crossing over can occur; however, the majority of gametes will possess extra deletions and duplications, subsequently diminishing fertility.

Chromosomal Aberrations

  • Inversion: Causes loops in meiotic synapsis, affecting gamete integrity and fertility, leading to reproductive isolation in homozygotes.
  • Translocation: Creates crosses in meiotic synapsis, causing segregation issues, with homozygotes having normal fertility but being reproductively isolated.
  • Robertsonian Translocation: Fusion of two acrocentric chromosomes alters number and causes reproductive issues, linked to Down's syndrome.

Chromosomal Comparisons and Polyploidy

  • Human vs. Great Ape Chromosomes: Similarities with differences mainly in inversions.
  • Polyploidy:
  • Autopolyploidy: More than two genome copies from one species.
  • Allopolyploidy: Genomes from two or more different species, causing spindle blocking and conjugation issues.

Polytene Chromosomes

  • Location: Common in dipteran larvae's secretory cells.
  • Characteristics:
  • Large, containing thousands of DNA strands.
  • Facilitate high gene expression levels.
  • Result from multiple DNA synthesis cycles without cell division, keeping daughter chromatids together.
  • Formation: Occurs during endomitosis.
  • Structure:
  • Length: 0.5 mm.
  • Diameter: 20µm.
  • Contains two types of bands:
  • Dark Bands: Higher DNA content, lower RNA.
  • Interbands: Lower DNA content, higher RNA.
  • Bands and Gene Expression:
  • Puffs indicate active gene sites, where mRNA synthesis occurs, appearing and disappearing during larval development.

Lampbrush Chromosomes

  • Occurrence: In meiotically paired chromosomes of growing oocytes in many animals (excluding mammals).
  • Structure: Loops of decondensed chromatin correspond to active DNA sequences, while most DNA remains condensed.

Barr Body in Oral Mucosa Cells

  • Also Known As: Sex chromatin.
  • Function: Inactivates one X chromosome in female somatic cells to balance gene expression.
  • Mechanism:
  • Females have two X chromosomes; one is inactivated to regulate the amount of expressed genetic information.
  • Packaged into heterochromatin, making it less accessible for transcription.

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